Alternate identifier:
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Related identifier:
(Is Part Of) 10.48606/50 - DOI
Title:
TwinNetworkDataset032
Additional titles:
-
Description:
(Other) The data comprises bright-field time-lapse images of zebrafish embryos acquired in multiple batches within multi-well plates using an Acquifer Imaging Machine. Embryos from incrosses of Tg(sebox:EGFP) and incrosses of TE zebrafish strains were used for imaging. Small-molecule signaling pathway modulator LDN-193189 was added to well A2 with a final concentration of 3.5 µM and to well A3 with a final concentration of 4 µM. Small-molecule signaling pathway modulator SB-505124 was added to wells B1-B3 with final concentrations of 4 µM in well B1, 5 µM in well B2, and 6 µM in well B3. Well A1 did not receive small-molecule signaling pathway modulator treatment. Imaging started with embryos between 2-3 hpf and ended with embryos between 27-28 hpf. Images of embryos were acquired at 180 acquisition time points with a time interval of 501 s between each acquisition time point. Individual embryo segments were identified and extracted using a trained neural network for object detection. Within this experiment folder, data are organized by microscope position and embryo number.
Keywords:
Twin Network
TwinNet
zebrafish
embryogenesis
deep learning
developmental biology
computational biology
Related information:
-
Language:
-
Production year:
Subject areas:
Biology
Resource type:
(Dataset) Dataset for Twin Network; Brightfield microscopy data of zebrafish embryos 2-28hpf
Data source:
-
Software used:
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Data processing:
-
Publication year:
Rights holders:
Müller, Patrick
Funding:
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Archiving date:
2023-04-14
Archive size:
42.9 GB
Archive creator:
9db020d1f09ef008baffdbfbe06678ff
Archive checksum:
7fd79c8216e981a4686e463bb90ba773 (MD5)
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