Alternativer Identifier:
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Verwandter Identifier:
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Ersteller/in:
Sawade, Kevin https://orcid.org/0000-0002-7735-1488 [University of Konstanz]

Marx, Andreas https://orcid.org/0000-0002-6471-3689 [University of Konstanz]

Peter, Christine https://orcid.org/0000-0002-1471-5440 [University of Konstanz]

Kukharenko, Oleksandra https://orcid.org/0000-0002-3285-1403 [Max-Planck Institute for Polymer Research]
Beitragende:
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Titel:
Dataset: Combining molecular dynamics simulations and scoring method to computationally model ubiquitylated linker histones in chromatosomes
Weitere Titel:
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Beschreibung:
(Abstract) The dataset comprises atomistic molecular dynamics simulations of ubiquitylated linker histone H1. The provided data has been stripped from solvent and subsampled with a 50 ps timestep. The six ubiquitylation sites K30, K41, K47, K51, K56, and K63 can be found in their respective folders. The starting structures were created by rotating the chi3 angle of the ubiquitylated lysine. The simulation data encompasses the simulations from these starting structures plus so-called expansion simulations started from these initial simulations. Find more info in the provided README.
Schlagworte:
Molecular Dynamics
Gromacs
Linker histone
Ubiquitin
Chromatin
Nucleosome
Chromatosome
Zugehörige Informationen:
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Sprache:
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Herausgeber/in:
Universität Konstanz
Erstellungsjahr:
Fachgebiet:
Chemistry
Objekttyp:
Dataset
Datenquelle:
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Verwendete Software:
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Datenverarbeitung:
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Erscheinungsjahr:
Rechteinhaber/in:
Förderung:
The authors acknowledge support by the state of Baden-Württemberg through bwHPC
bwForCluster MLS&WISO: DFG grant INST 35/1134-1 FUGG
German Research Foundation through CRC 969
Carl-Zeiss-Stiftung
Name Speichervolumen Metadaten Upload Aktion
Status:
Publiziert
Eingestellt von:
01e78fc7b0e19e6cfe96d9ce130a99e1
Erstellt am:
Archivierungsdatum:
2023-07-05
Archivgröße:
5,1 GB
Archiversteller:
9db020d1f09ef008baffdbfbe06678ff
Archiv-Prüfsumme:
de64c215efa58e06c25ea43c52ce966a (MD5)
Embargo-Zeitraum:
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